Category Archives: Science

Whereupon Gaussling spoke in allegory

After a deep but unrestful slumber, I awoke to find myself in a dark wood. I cannot account for exactly how I came to be in this gloomy place. It is a hard thing to grasp even now.  As I look back to that dark encampment, my heart quickens at the knowledge of what is to follow.  

After many hours of climbing through the dense thicket, I chanced upon a path that lead through the gloom to a valley whose hilltops glistened in the morning sunlight.  As I trod over a small hillock to the opening of the valley, I spotted a jackal some distance ahead in the path before me.  I stopped to rest for a while and ponder the situation. As I rested, the fearful animal disappeared into the tall grass of the glade.  Having lost some of my weariness, I again took to the sinuous path in the direction of the now rising sun.

The day wore on and the shadows retreated to their origin under the noonday sun. I began to notice large, flat field stones along the path.  As I continued my journey, they became greater in number and were festooned with a great many lichen encrusted runes. The stones were partially buried and had evidently been organized at some time in the distant past.  I am familiar with many styles of writing and symbols, but these marks were decidedly odd. Not only were they unfamiliar, but they were chisled by a hand accustomed to a wholly different way of using language.  I found one particularly large stone with a great many markings on it.  As I looked at the marks, I stepped around it to view the runes from different directions, trying to ascertain some form of structure and syntax.

What could these stones represent? After some time, I began to note that certain markings were found elsewhere, though in different combinations. Perhaps through inattention I wandered from the path for some distance into the glade.  Finally, shaken from the enchantment of these stones I tried to regain my bearings. I struck off in the direction of a nearby col in the mountains, hoping to intercept the path by sundown. 

As I broke a trail through the high grass a moving shape caught my attention.  It was on the left side of my view and may have only been a bird taking flight from a shrub. I had nearly forgotten about the curious animal I spotted earlier in the day, so the movement startled me.  Was it a shy visitor or a predator? Trying to take my mind off this unpleasant topic, my mind returned to the runes. What could they be saying?

[With apologies to Dante Alighieri- Th’ Gaussling]

Bloggenvolk Chicago ACS Meeting

A group photo at the Chicago ACS meeting.  That would be fun and blessedly easy.  If bloggenvolk want to linger and talk, they could do that. (If you haven’t been to the Art Institute, I heartily advise a visit.)  It’ll be Chicago in March, so that means outdoors may be nasty.  We just need someone to shoot the photo and post it somewhere on the web. 

What about monday noon, at the convention center, in the entrance near that rotating product literature carosel they always have? Any takers?? C’mon.  Be a sport! I’ll be wearing a badge that says “Gaussling”. 

Bloggenvolk

It would could be fun to meet other bloggers at the ACS meeting in Chicago.  Eventually we’re going to have to have some kind of official (ACS sanctioned) function where bloggers can get together at these meetings.  We’re all driven to write about chemistry in one way or other and I’d say, for the most part, we’re all smitten with this science.  Chemistry bloggers are science writers.  We write because we are driven to do it.

It would have to be done in a way that is not threatening to anyone.  Basically we’re all anonymous writers.  I suppose that fact could be viewed as kind of creepy in some way- I don’t want to run into some wacko either.  But wouldn’t it be fun to sit with other bloggenvolk at the convention hall and chat?  I think it could be lots of fun. The pseudonym stuff wears thin. 

Eventually it’ll happen. This mode of communication isn’t going to disappear anytime soon.

Active Denial System- RF Radiation Weapons

It appears that some of our clever friends and neighbors at the local military/industrial complex have been busy designing millimeter-wave radio frequency weapons.  Last year the DoD announced the development of a new form of weapon billed as non-lethal to fill the “gap between shoot and shout”.  The device consists of a powerful rf source and what must be a fairly narrow beamwidth antenna for illuminating unruly people.  The website includes video clips of test subjects and their descriptions of what it feels like to be on the receiving end of this radiation weapon. 

I refer to it as a radiation weapon because that is precisely what it is.  Millimeter wave radiation is directed at a person or a crowd and in short order the recipients in the beam feel their skin temperature rise to discomfort. Whether it truly raises skin temperature or the sensation is an artifact of surface electrical currents in the skin is unclear. The fact is that it can cause instantaneous discomfort and anxiety about burning to a crisp.  Obviously, the purpose is to discourage aggressive behaviour in individuals or of crowds and do so in a non-lethal manner. 

So, really, what is wrong with this?  In a sense it is like a shock collar on a dog.  An occasional burst of juice causes the unruly dog to suspend the offensive behaviour.  The dog learns the lesson and is not physically harmed by it. 

I’ll admit to being quite uncomfortable with this “technology”.  The potential for abuse and exploitation is staggering.  If a short burst of rf energy will cause people to scatter or desist their behaviours, what will a long exposure do?  And, just what happens to someone on prolonged exposure?

What is the difference between negative reinforcement and torture?  Is it the difference between a 5 second exposure and 60 seconds?  And, when will a tin-pot dictator acquire this capability now that we have proudly trotted ours out?  Whereas ours will have controls for non-lethal operation, would a terror group or arms merchant bother to have safety protocols to guard against overexposure? Maybe a stripped down version absent interlocks will be the weapon of choice among African dictatorships.

How long will it take for civilian units to come on stream? What US city will be the first to acquire one of these things for crowd control and when?  LA?  DC?  NYC?? 2015? 2020?  Pretty soon every SWAT commander will be clamoring for one “just in case”.  Whose march on the Capital Mall in DC will trigger the first use of such a device on civilians? 

Can the energy be reflected back to the source or in some other direction?  Is a metal trash can lid or aluminized mylar blanket an effective countermeasure?  Maybe we’ll see rock throwing 12 year olds in Gaza with a stone in one hand and a trash can lid in the other after its inevitable introduction in the middle east.

Microwave/millimeter technology is ubiquitous.  No nuclear materials. No ammunition.  Just a powerful rf source and an antenna. No doubt arms merchants are already lining up buyers for this weapon of mass agony.

What a lamentable development for mankind.  Our ability and willingness to commit violence from a distance is one of our greatest downfalls.

Tvashtar’s Plume

While we ground pounders were conducting our tedious lives deep in earths gravity well, the Pluto-Kuiper Belt probe “New Horizons” made it’s closest approach to Jupiter on Wednesday, 28 February, 2007. Swinging past this enormous ball of gas for a gravity assist, the probe trained its LORRI imager on the moon Io and caught an amazing picture. The photo shows the volcano Tvashtar ejecting a plume 290 km from the surface.  On the left one can also see a plume of ejecta from the volcano Prometheus. 

Better Gadgets

The National Nuclear Security Administration (NNSA) announced on 3-2-07 that the US would be pursuing the Reliable Replacement Warhead (RRW) program.  The program makes a lot of sense on many levels. But the timing of the press release is a bit odd.  Certain sandy states will no doubt notice the irony of the program. While the US is browbeating them into abandoning their dreams of a fissile future, we on the other hand are pursuing better and safer nukes.  Of course, we’ll argue that it is a smaller and safer stockpile, and I’m sure that is true. But I’ll wager that the next generation nuke will be designed for better efficiency as well. 

Maybe we’ll launch them from the new Cheney Class of submersible aircraft carriers…

New Failure Modes

Chemistry can be very humbling.  A person can be absolutely sure of how a new reaction or process will turn out and yet be absolutely dead wrong.  Process research is an engine that consumes dollars and churns out new failure modes in one big pile and positive results in a smaller, steaming heap. 

I have been working with ionic compounds that have weakly coordinating anions.  I’m finding that my finely honed intuition built from years of shame, suffering, and cruel humiliation is turning up flat wrong more times than I care to admit. A house of cards.

More than a few of these compounds seem to participate in the formation of a liquid phase in the right combination of solvents.  If I were keen on monkeying with ionic liquids, this would be just dandy.  But the product is a solid and I want to purify it by xtallization.  I’m tempted to categorize these liquid phases as clathrates, but I’m unclear if the definition will acommodate such a thing. In each case, a normally miscible solvent pair is required to split out the new phase when the weakly coordinating ion pair is dissolved in the more polar solvent. 

There is a happy ending to this.  I was able to isolate solid product from a 2-solvent system, but sadly, I would be hunted down and shot like an egg-sucking dog if I disclosed it.  Bummer.

UV-Vis Spectrum of POM Pomegranate Juice

Below is a link to a UV-Vis spectrum of POM brand Pomegranate Juice.  The graph shows two spectra- one is a simple dilution of POM-brand pomegranate juice. The other, lower extinction, spectrum was a simple dichloromethane (DCM) extraction of undiluted pomegranate juice as it comes out of the bottle. The extraction was done with a 1:1 v/v ratio of DCM to juice. Notably, the DCM extract contained no visible color. The layers emulsified and had to sit for ~10 minutes to separate. The DCM extract was dried over a bit of magnesium sulfate and filtered.  The undiluted extract was submitted directly to analysis. The dashed curve is the spectrum of the extract.

What is interesting about the extract is that the absorption maxima do not align with the maxima of the whole juice.  The DCM soluble fraction is quite different electronically from the balance of the components. Indeed, the extinction drops off to 0.026 by 350 nm and drops to near zero thereafter.  It is important to note that the absorbance of the extract is based on a much more concentrated solution, so a direct comparison of absorbances with the highly diluted whole juice is not valid. Focus instead on the wavelength of the maxima.

I ran the spectrum of the whole juice as a 500 to 1 dilution in distilled water.  No attempt was made to buffer the pH of the water or to filter the juice. I fully realize that there are experimental control issues to contend with here- i.e., pH dependence, turbidity, oxidative degradation due to air exposure, etc. 

POM Pomegranate Juice UV-Vis

According to the literature, pomegranate juices contain varying amounts of polyphenolic, tannin-type species not just from the juice, but also material that is released from the rind in the pressing process.  So further experiments should try to obtain juice that is pressed in a way to discourage the inclusion of materials from other plant tissues.

According to one source, the components of pomegranate juice can stabilize the level of PSA in men who have prostate cancer.  Whether it works via the anti-oxidant properties or some other more specific interaction is unclear.

Just what is the point of running these spectra?  My original interest related to the visible part of the spectrum. I wanted to know what the visible spectrum of this intensely colored juice looked like.  What is evident is that for all of the extinction in the visible part of the spectrum (>350 nm), the UV band is much more intensely “colored”. That is, the extinction is much higher in the UV range (<350 nm). Why UV-Vis spectra?  Because, silly, I don’t have an NMR. But I do have a UV-Vis spectrometer.

Well, that’s not quite true. I can run a proton NMR of the crude material, but given that pomegranate juice is a plant fluid, all I’m going to see is a forest of peaks.  Actually, more to the point, others have isolated components from this fruit.  My interest is in the reduction capacity of the pigments.

Extracting structural data from a UV-Vis spectrum is not really possible. UV-Vis spectroscopy is about electronic transitions and a wide variety of species overlap appreciably, so structural determinations of components in complex mixtures is out of the question.  Furthermore, pomegranate juice is sensitive to oxidative degradation and is likely to be quite sensitive to pH (next on the agenda), so it’s thermal and O2 exposure history may be important (i.e., has it been Pasteurized, etc).  So it’s back to the drawing board.  

Solar System Simulator

NASA has a great website with a solar system simulator in it.  For instance, it will simulate the positions of the various satellites of the planets.  It also gives the user a choice of sites from which to take in the view.  So, if you are going to look at Jupiter some evening through your backyard telescope, you should be able to identify the 4 brighter moons.